Name | The Functional RNA Sequence Database |
Aliases | fRNAdb |
Description | fRNAdb is a sequence database hosting a large collection of non-coding RNA sequence data from public non-coding databases.fRNAdb allows users to search the sequences through keywords associated with them. Various kinds of information are associated with a sequence.fRNAdb also provides sequence homology search using Blastn. |
Type | DB |
Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
Country of the Institute | Japan |
URL of the site | https://dbarchive.biosciencedbc.jp/jp/frnadb/desc.html |
Interface | GUI |
Input example | Input "miRNA" in the text area then click on "submit" button.Try add a word to make your query a bit more specific e.g., "miRNA human". |
Keyword | RNA | Functional RNA |
Amount of the all data for download(Mbyte) | Method to obtain the all data. | 53|Click on Download menu in the top page to grab the whole data. |
External resources (databases) in building the product. | RNAdb | Rfam | Gene Expression Omnibus | miRBase | NONCODE | H-invitational | snoRNA-LBME-db | European ribosomal RNA database |
Data type | RNA |
Biological species in the main concern | All species |
Conditions of use | CC BY-SA 2.1 JP |
Frequency of updates (in last two years) | 0 |
Last date of updates (date of confirmation) | 2011/00/00 (2019/07/02) |
Main IDs used in the products | FR |
How to make a link to get access to each IDs. | http://togodb.biosciencedbc.jp/togodb/view/frnadb_summary |
external databases to which this database/tool have links | None |
Published papers (PubMed IDs) | pmid:18948287 |
Operational Status | Archived |