Name | UCSC GenomeBrowser for Functional RNA |
Aliases | None |
Description | UCSC GenomeBrowser for Functional RNA is a UCSC Genome Browser mirror with large additional custom tracks specifically associated with non-coding elements. It also includes several functional enhancements such as a presentation of a common secondary structure prediction at any given genomic window <500 bp. |
Type | DB |
Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
Country of the Institute | Japan |
URL of the site | - |
Interface | GUI |
Input example | Unknown |
Keyword | Aspergillus oryzae | Saccharomyces cerevisiae |
Amount of the all data for download(Mbyte) | Method to obtain the all data. | 0|None |
External resources (databases) in building the product. | Many |
Data type | Comparative genomics |
Biological species in the main concern | Homo sapiens | Rattus norvegicus | Drosophila melanogaster | Aspergillus oryzae [Taxonomy_id: 5062] | Bombyx mori [Taxonomy_id: 7091, domestic silkworm] | Caenorhabditis elegans [Taxonomy_id: 6239] | Ciona intestinalis [Taxonomy_id: 7719, vase tunicate] | Drosophila melanogaster [Taxonomy_id: 7227, fruit fly] | Homo sapiens [Taxonomy_id: 9606, human] | Rattus norvegicus [Taxonomy_id: 10116, Norway rat] | Saccharomyces cerevisiae [Taxonomy_id: 4932, baker's yeast] |
Conditions of use | Attribution&Share Alike |
Frequency of updates (in last two years) | 0 |
Last date of updates (date of confirmation) | 2015/08/20 (2019/07/02) |
Main IDs used in the products | - |
How to make a link to get access to each IDs. | None |
external databases to which this database/tool have links | None |
Published papers (PubMed IDs) | pmid:18948287 |
Operational Status | Closed |