Name UCSC GenomeBrowser for Functional RNA
Aliases None

UCSC GenomeBrowser for Functional RNA is a UCSC Genome Browser mirror with large additional custom tracks specifically associated with non-coding elements. It also includes several functional enhancements such as a presentation of a common secondary structure prediction at any given genomic window <500 bp.

Type DB
Main Institutes of management "Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the Institute Japan
URL of the site -
Interface GUI
Input example

Under investigation

Under investigation
Amount of the all data for download(Mbyte) | Method to obtain the all data. 4096.0|unknown
External resources (databases) in building the product. Many
Data type Comparative genomics
Biological species in the main concern
"Homo sapiens | Rattus norvegicus | Drosophila melanogaster | ... More
  • Aspergillus oryzae [Taxonomy_id: 5062]
  • Bombyx mori [Taxonomy_id: 7091, domestic silkworm]
  • Caenorhabditis elegans [Taxonomy_id: 6239]
  • Ciona intestinalis [Taxonomy_id: 7719, vase tunicate]
  • Drosophila melanogaster [Taxonomy_id: 7227, fruit fly]
  • Homo sapiens [Taxonomy_id: 9606, human]
  • Rattus norvegicus [Taxonomy_id: 10116, Norway rat]
  • Saccharomyces cerevisiae [Taxonomy_id: 4932, baker's yeast]
Conditions of use Attribution&Share Alike
Frequency of updates (in last two years) 0
Last date of updates (date of confirmation) 2009/02/01 (2012/07/06)
Main IDs used in the products -
How to make a link to get access to each IDs. None
external databases to which this database/tool have links


Published papers (PubMed IDs)