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ID Converter System
| Name | ID Converter System |
|---|---|
| Aliases | biodb.jp |
| Description | ID Converter System is an original tool for converting IDs used in major databases related to human genes and proteins worldwide. For details, please refer to the document here (http://staff.aist.go.jp/t.imanishi/about_hms.html). |
| Type | Tool |
| Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://biodb.jp/#ids |
| Interface | GUI | CGI |
| Input | ID list(Text) |
| Output | ID list(Text(TSV)) |
| Input example | Select ID types and input a list of IDs in the textbox, and push the "Search" button. You can specify a text file with a list of IDs on your client PC. |
| Keyword | Gene ID |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0.0|None |
| External resources (databases) in building the product. | DDBJ | EMBL | GenBank | H-InvDB | UniProt | PDB | HUGO |
| Data type | Data identifiers (IDs) |
| Biological species in the main concern | Human |
| Conditions of use | Attribution&Share Alike |
| Frequency of updates (in last two years) | 730 |
| Last date of updates (date of confirmation) | 2010/09/10 (2019/06/03) |
| Main IDs used in the products | Accession Number | CIPRO ID | Clone ID (NBRC) | DGV ID | DrugBank ID | Ensembl Gene ID | Ensembl Protein ID | Ensembl Transcript ID | FLJ ID (NBRC) | GeneID | H-GOLD Marker ID | H-Inv cluster ID (HIX) | H-Inv protein ID (HIP) | H-Inv transcript ID (HIT) | HPRD ID | HUGO gene symbol | KEGG Gene ID | KEGG Pathway ID | OMIM ID | PDB ID | PdbeChem ID | Peptide Accession | PubMed ID | RefSeq ID | RefSeq Protein ID | UniProt Accession Number | dbSNP rs# (GemDBJ) | fRNAdb ID | ALLELE ID | BRC ID | Clone ID(FANTOM) | MGI Marker Accession ID | Mouse Gene Symbol RGD ID | CAS ID | ChEBI ID | DrugBank ID | HMDB Accession Number | KEGG Compound ID | KEGG Drug ID | KNApSAcK ID | NIKKAJI ID | PDBeChem ID | PharmGKB ID | PubChem Compound ID | PubChem Substance ID |
| How to make a link to get access to each IDs. | None |
| external databases to which this database/tool have links | None |
| Published papers (PubMed IDs) | pmid:19454601 |
| Operational Status | Available |
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