Name ID Converter System
Aliases biodb.jp
Description

"ID Converter System is an original tool for converting IDs used in major databases related to human genes and proteins worldwide. For details, please refer to the document here (http://staff.aist.go.jp/t.imanishi/about_hms.html)."

Type Tool
Main Institutes of management "Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the Institute Japan
URL of the site http://biodb.jp/#ids
Interface GUI | CGI
Input

ID list(Text)

Output

ID list(Text(TSV))

Input example

"Select ID types and input a list of IDs in the textbox, and push the "Search" button. You can specify a text file with a list of IDs on your client PC."

Keyword
Under investigation
Amount of the all data for download(Mbyte) | Method to obtain the all data. 0.0|in preparation
External resources (databases) in building the product. DDBJ | EMBL | GenBank | H-InvDB | UniProt | PDB | HUGO
Data type Data identifiers (IDs)
Biological species in the main concern
Human
Conditions of use Attribution&Share Alike
Frequency of updates (in last two years) 730
Last date of updates (date of confirmation) 2010/09/10 (2010/09/15)
Main IDs used in the products Accession Number | CIPRO ID | Clone ID (NBRC) | DGV ID | DrugBank ID | Ensembl Gene ID | Ensembl Protein ID | Ensembl Transcript ID | FLJ ID (NBRC) | GeneID | H-GOLD Marker ID | H-Inv cluster ID (HIX) | H-Inv protein ID (HIP) | H-Inv transcript ID (HIT) | HPRD ID | HUGO gene symbol | KEGG Gene ID | KEGG Pathway ID | OMIM ID | PDB ID | PdbeChem ID | Peptide Accession | PubMed ID | RefSeq ID | RefSeq Protein ID | UniProt Accession Number | dbSNP rs# (GemDBJ) | fRNAdb ID | ALLELE ID | BRC ID | Clone ID(FANTOM) | MGI Marker Accession ID | Mouse Gene Symbol RGD ID | CAS ID | ChEBI ID | DrugBank ID | HMDB Accession Number | KEGG Compound ID | KEGG Drug ID | KNApSAcK ID | NIKKAJI ID | PDBeChem ID | PharmGKB ID | PubChem Compound ID | PubChem Substance ID
How to make a link to get access to each IDs. Under investigation
external databases to which this database/tool have links

Under investigation

Published papers (PubMed IDs)

pmid:19454601