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DescriptionA workflow can be defined as a series of jobs or an efficient framework which can be used for similar repeatable work.As a simple example, there is a series of jobs which can be defined as a workflow. First, find homologous proteins to the given protein, then create a phylogenetic tree using those protein sequences. To do this, we first need to perform BLAST and pick several sequences for multiple sequence alignment. If we defined this flow as a workflow, every job will quickly and smoothly be done.(cited from the original site).
Main Institutes of managementMolecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the sitehttp://togo.medals.jp/en_index.html
InterfaceGUI (web, local)
Input exampleInput example for Protein Annotation Workflow (http://togo.medals.jp/wf/PAW_EnterSequence.html?Eng) :[Step1]Click the "SampleData" menu.[Step2]Input your E-mail address in "E-mail address:" textbox.[Step3]Push the "submit" button.
KeywordDeveloped workflow | Web workflow | Active workflow | Life Science Database Integration Web
Amount of the all data for download(Mbyte) | Method to obtain the all data.32 (RNA_Structure_Prediction-K (WINDOWS 32bit))|http://togo.medals.jp/active_local_rna_prediction.eng.html | http://togo.medals.jp/active_local_protein_prediction.eng.html | http://togo.medals.jp/active_local_phylo.eng.html | http://togo.medals.jp/active_local_mafft.eng.html | http://togo.medals.jp/active_local_blast.eng.html | http://togo.medals.jp/active_local_last.eng.html | http://togo.medals.jp/active_local_wolfpsort.eng.html | http://togo.medals.jp/active_local_modelling.eng.html | http://togo.medals.jp/active_local_centroid.eng.html | http://togo.medals.jp/active_local_poodle.eng.html | http://togo.medals.jp/active_local_asian.eng.html
External resources (databases) in building the product.None
Data typeworkflow
Biological species in the main concernAll species
Conditions of useAttribution & Creative Commons-NonCommercial 2.1 Japan
Frequency of updates (in last two years)2
Last date of updates (date of confirmation)2018/11/11 (2019/06/03)
Main IDs used in the productsNone
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksMinistry of Education, Culture, Sports, Science and Technology Integrated Database Project (http://lifesciencedb.mext.go.jp/en/index.html) | MEXT Integrated Datavase Project (http://lifesciencedb.jp/) |DBCLS (http://dbcls.rois.ac.jp/) | KNIME (http://www.knime.org/) | taverna (http://taverna.sourceforge.net/) | Kepler (https://kepler-project.org/)
Published papers (PubMed IDs)None
Operational StatusAvailable