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Tool

Raccess

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NameRaccess
AliasesNone
DescriptionRaccess is the tool for genome-scale computation of structural accessibility of RNA transcripts (cited from the original site).
TypeTool
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the sitehttp://rtools.cbrc.jp/
InterfaceCUI
InputNucleic acid sequence(FASTA format)
OutputAccesivity of structure(Text、PDF, PNG, EPS)
Input examplerun_raccess.exe -seqfile=input_seq (FASTA format) -bind_range=1:7
KeywordsiRNAs | miRNAs | accessibiility | genome-scale
Amount of the all data for download(Mbyte) | Method to obtain the all data.None
External resources (databases) in building the product.None
Data typeRNA
Biological species in the main concernAll species
Conditions of useNone
Frequency of updates (in last two years)1 time / year
Last date of updates (date of confirmation)2009/01/01 (2019/07/09)
Main IDs used in the productsN/A
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)None
Operational StatusAvailable