Name Raccess
Aliases None
Description

Raccess is the tool for genome-scale computation of structural accessibility of RNA transcripts (cited from the original site).

Type Tool
Main Institutes of management "Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the Institute Japan
URL of the site http://rtools.cbrc.jp/
Interface CUI
Input

Nucleic acid sequence(FASTA format)

Output

"Accesivity of structure(Text、PDF, PNG, EPS)"

Input example

run_raccess.exe -seqfile=input_seq (FASTA format) -bind_range=1:7

Keyword
siRNAs | miRNAs | accessibiility | genome-scale
Amount of the all data for download(Mbyte) | Method to obtain the all data. None
External resources (databases) in building the product. None
Data type RNA
Biological species in the main concern
All species
Conditions of use Under investigation
Frequency of updates (in last two years) 1 time / year
Last date of updates (date of confirmation) 2009/01/01 (2011/01/12)
Main IDs used in the products N/A
How to make a link to get access to each IDs. None
external databases to which this database/tool have links

N/A

Published papers (PubMed IDs)

Under investigation