| Name | COSMOS |
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| Aliases | Somatic Large Structural Variation Detector |
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| Description | COSMOS can detect somatic structural variations from whole genome short-read sequences. Also, it can be applicable to de novo SV detection in a family trio |
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| Type | Tool |
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| Main Institutes of management | Biotechnology Research Institute for Drug Discovery, National Institute of Advanced Industrial Science and Technology (AIST) |
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| Country of the Institute | Japan |
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| URL of the site | http://seselab.org/cosmos/ |
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| Interface | CUI |
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| Input | Chromosome location(BAM format) |
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| Output | Statistics(Text) |
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| Input example | Simple example. %bash cosmos.sh cosmos_example/tumor.bam cosmos_example/normal.bam |
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| Keyword | Somatic structural variations |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 15.9|http://seselab.org/cosmos/cosmos.zip |
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| External resources (databases) in building the product. | unknown |
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| Data type | DNA-sequnece |
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| Biological species in the main concern | All species |
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| Conditions of use | none |
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| Frequency of updates (in last two years) | unknown |
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| Last date of updates (date of confirmation) | 2016/00/00 (2019/07/09) |
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| Main IDs used in the products | None |
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| How to make a link to get access to each IDs. | None |
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| external databases to which this database/tool have links | None |
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| Published papers (PubMed IDs) | |
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| Operational Status | Available |
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