| Name | Recount |
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| Aliases | None |
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| Description | RECOUNT is a software for estimating the true count of Solexa readsbased on a probabilistic model. RECOUNT uses the quality score provided by Solexa and the reads as its input. Typical application of this software is for transcriptome or metagenomic expression analysis (cited from the original site). |
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| Type | Tool |
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| Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
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| Country of the Institute | Japan |
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| URL of the site | - |
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| Interface | CUI |
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| Input | |
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| Output | |
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| Input example | You can run recount by executing the wrapper written in Perl.The command is simply:perl recount.pl <input><no_of_neighbor_mismatch> |
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| Keyword | Probabilistic Error Correction |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0.118|http://seq.cbrc.jp/recount/archive/ |
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| External resources (databases) in building the product. | None |
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| Data type | DNA-sequence Next Generation Sequencing Data |
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| Biological species in the main concern | All species |
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| Conditions of use | GPL |
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| Frequency of updates (in last two years) | 2 times / year |
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| Last date of updates (date of confirmation) | 2010/09/24 (2019/06/03) |
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| Main IDs used in the products | N/A |
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| How to make a link to get access to each IDs. | None |
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| external databases to which this database/tool have links | N/A |
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| Published papers (PubMed IDs) | pmid:20180274 |
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| Operational Status | Closed |
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