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GPCRs Interaction Partners

NameGPCRs Interaction Partners
DescriptionG-protein coupled receptor interaction partners (GRIP) is the web application to predict protein-protein interaction interfaces for G-protein coupled receptor oligomerization. This application provides predicted interfaces by Spatial Cluster Detection (SCD), Predicted interfaces are displayed interactively by using Jmol (cited from the original site).
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the site-
Input example[step1] Input a multiple sequence alignment (MSA) including the prediction target in an input sequence box.[step2] Select appropriate numbers or IDs for four parameters.[step3] Click the "execute" button. The sample sequences are ready at example sequences page: http://grip.cbrc.jp/GRIP/pages/Examples/examples.html
KeywordGPCR | MSA | Rhodopsin | BETA1AR | BETA2AR | A1AR
Amount of the all data for download(Mbyte) | Method to obtain the all data.0|None
External resources (databases) in building the product.None
Data typeInteraction GPCR
Biological species in the main concernAll species
Conditions of useNone
Frequency of updates (in last two years)4 or more times / year
Last date of updates (date of confirmation)2011/06/17 (2019/06/03)
Main IDs used in the productsN/A
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)pmid:19888901 | pmid:15593372 | pmid:17168789 | pmid:11800565
Operational StatusClosed