| Name | Stem Kernels |
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| Aliases | None |
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| Description | Stem Kernels is a kernel function for structural RNAs to measure a kind of similarity between a pair of RNA sequences from the viewpoint of secondary structures (cited from the original site). |
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| Type | Tool |
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| Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
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| Country of the Institute | Japan |
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| URL of the site | - |
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| Interface | CUI |
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| Input | |
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| Output | |
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| Input example | stem_kernel_lite -n pre-computed-kernel-matrix +1 input_positive_seq(FASTA format) -1 input_negative_seq(FASTA format) |
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| Keyword | karnel function | RNA sequence | directed acyclic graphs | DAGs |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | None |
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| External resources (databases) in building the product. | None |
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| Data type | RNA |
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| Biological species in the main concern | All species |
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| Conditions of use | GPL |
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| Frequency of updates (in last two years) | None |
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| Last date of updates (date of confirmation) | 2011/03/12 (2019/07/05) |
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| Main IDs used in the products | N/A |
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| How to make a link to get access to each IDs. | None |
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| external databases to which this database/tool have links | N/A |
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| Published papers (PubMed IDs) | pmid:18647390 | pmid:17933013 |
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| Operational Status | Closed |
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