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Tool

CentroidAlifold

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NameCentroidAlifold
AliasesNone
DescriptionCentroidAlifold provides Accurate (common) secondary structure prediction for aligned RNA sequences.You can download CentroidAlifold software , which was contained in CentroidFold package (cited from the original site).
TypeTool
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the site-
InterfaceGUI
Input
Output
Input examplecentroid_alifold [options] input_seq(FASTA format)
KeywordRNA secondary structure | RNA aligned sequence | Centroifold
Amount of the all data for download(Mbyte) | Method to obtain the all data.None
External resources (databases) in building the product.None
Data typeRNA secondary structure
Biological species in the main concernAll species
Conditions of useGPL
Frequency of updates (in last two years)1 time / year
Last date of updates (date of confirmation)2011/01/01 (2019/07/05)
Main IDs used in the productsN/A
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)pmid:20843778
Operational StatusClosed