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CentroidHomfold
| Name | CentroidHomfold |
|---|---|
| Aliases | None |
| Description | CentroidHomfold provides RNA Secondary Structure prediction using Homologous Sequences.You can download CentroidHomfold software, which was contained in CentroidFold, or use CentroidHomfold-LAST Web-Server (cited from the original site). |
| Type | Tool |
| Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://rtools.cbrc.jp/ |
| Interface | CUI | GUI |
| Input | Nucleic acid sequence(FASTA format) |
| Output | Secodary structure of RNA(Text, PNG, PDF, EPS format) |
| Input example | centroid_homfold [options] input_seq(FASTA format) |
| Keyword | RNA secondary structure | homologous sequence | LAST | Centroidfold |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | None |
| External resources (databases) in building the product. | None |
| Data type | secondary structure |
| Biological species in the main concern | All species |
| Conditions of use | GPL |
| Frequency of updates (in last two years) | 1 or more times / year |
| Last date of updates (date of confirmation) | 2011/01/01 (2019/06/03) |
| Main IDs used in the products | N/A |
| How to make a link to get access to each IDs. | None |
| external databases to which this database/tool have links | N/A |
| Published papers (PubMed IDs) | pmid:19478007 |
| Operational Status | Available |
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