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Tool

TMBETA-NET

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NameTMBETA-NET
AliasesNone
DescriptionTMBETA-NET is the program to discriminates outer membrane proteins and predicts transmembrane beta strands in an outer membrane protein from its amino acid sequence.Ref.)http://unit.aist.go.jp/plan/enterprise-report/h16enterprise-report.pdf
TypeTool
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the site-
InterfaceGUI
Input
Output
Input exampleInput amino acid sequence and click on "predict".
Keywordtransmembrane beta strands | outer membrane protein
Amount of the all data for download(Mbyte) | Method to obtain the all data.0.0|None
External resources (databases) in building the product.PDB | PSORT | Literature
Data typeProtein-motif
Biological species in the main concernAll species
Conditions of useUser account is not required.
Frequency of updates (in last two years)0
Last date of updates (date of confirmation)2004/11/05 (2019/07/08)
Main IDs used in the productsNone
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksNone
Published papers (PubMed IDs)pmid:15531602 | pmid:15980447 | pmid:14978719
Operational StatusClosed