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H-ANGEL
| Name | H-ANGEL |
|---|---|
| Aliases | he Human Anatomic Gene Expression Library |
| Description | H-ANGEL is a resource which provides information on human gene expression. H-ANGEL displays expression patterns of transcriptional products generated by the H-Invitational project in practical tissue categories based on tissue-specific expression data from several experimental platforms. H-ANGEL also displays information for the expression of different genes at their corresponding physical positions in the human genome. This information is linked to the corresponding transcript or locus annotation data stored in H-InvDB. |
| Type | DB |
| Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://h-invitational.jp/hinv/h-angel/ |
| Interface | GUI |
| Input example | Select a data ID type from pull-down menus, input the ID to text box. Then push "Submit" button. Meanwhile, push "Go to Pattern Search" button. |
| Keyword | Gene Expression |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 25|http://h-invitational.jp/hinv/download/h-angel/H-ANGEL_matrix.txt.gz |
| External resources (databases) in building the product. | The expression data from an external institution is used. Refer to "4.4.4 Summary of all the Expression Data Sources used by H-ANGEL.(H-InvDB_3.0)" on the site(http://www.h-invitational.jp/hinv/help/help_index_jp.html) for details. |
| Data type | Gene expression |
| Biological species in the main concern | Homo sapiens [Taxonomy_id: 9606, human] |
| Conditions of use | None |
| Frequency of updates (in last two years) | 1 |
| Last date of updates (date of confirmation) | 2015/05/27 (2019/07/03) |
| Main IDs used in the products | H-Inv locus ID | Accession Number | UniGene ID | GeneID | OMIM ID | Definition(Genbank) | Product(Genbank) |
| How to make a link to get access to each IDs. | http://h-invitational.jp/hinv/h-angel/wge_server.cgi?gpid=[HIX] |
| external databases to which this database/tool have links | UniGene(http://www.ncbi.nlm.nih.gov/sites/entrez?db=unigene) | BodyMap(http://bodymap.ims.u-tokyo.ac.jp/) | LSBM(http://www.lsbm.org/site_e/database/about.html) |
| Published papers (PubMed IDs) | pmid:18089548 |
| Operational Status | available |
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