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AliasesG-protein Receptor Interacting Feature Finding INstrument
DescriptionIt is a high-throughput system to predict GPCR - G-protein coupling selectively with the input of GPCR sequence and ligand molecular weight. This system consists of two parts:1) HMM section using family specific multiple alignment of GPCRs, 2)SVM section using physico-chemical feature vectors in GPCR sequence.
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the site-
Input exampleEnter potential GPCR sequence in the text box, and push "Predict" button.
KeywordG-protein coupling receptor|prediction
Amount of the all data for download(Mbyte) | Method to obtain the all data.-|None
External resources (databases) in building the product.None
Data typePtotein-sequence , amino acid sequence
Biological species in the main concernAll species
Conditions of useNone
Frequency of updates (in last two years)3
Last date of updates (date of confirmation)2005/08/03 (2019/06/03)
Main IDs used in the productsNone
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksNone
Published papers (PubMed IDs)Yabuki Y, Muramatsu T, Hirokawa T, Mukai H and Suwa M (2005). Nucleic Acids Res , 33 , W148-153.
Operational StatusClosed