| Name | PPI view |
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| Aliases | Protein-Protein Interaction viewer |
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| Description | The PPI view displays H-InvDB human protein-protein interaction (PPI)information. PPI data were collected from five major public PPI databases (BIND, DIP, MINT, HPRD, IntAct) and integrated them as a non-redundant PPI dataset. As the result, we got 32,198 human PPIs comprised of 9,268 proteins. (at H-InvDB version 5.0) The PPI view displays proteins which interact with the usersCHR(39) query proteins (or gene products), and provides links to H-InvDB locus view and cDNA view, which guide you to the gene locations and the detailed gene functional annotations of these interacting proteins, respectively.PPI view: http://www.h-invitational.jp/hinv/ppi/ PPI view sample:http://h-invitational.jp/hinv/ppi/ppi_view.cgi?hip=HIP000084307 |
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| Type | DB |
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| Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
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| Country of the Institute | Japan |
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| URL of the site | http://www.h-invitational.jp/hinv/ppi/index.html |
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| Interface | GUI |
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| Input example | We can search for our proteins of interest by inputting their keywords, H-InvDB IDs, or accession numbers on the search window of the top page (http://www.h-invitational.jp/hinv/ppi/index.html). |
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| Keyword | PPI | protein-protein interaction |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0.0|None |
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| External resources (databases) in building the product. | BIND http://www.bind.ca/Action|DIP http://dip.doe-mbi.ucla.edu|MINT http://mint.bio.uniroma2.it/mint/Welcome.do|HPRD http://www.hprd.org|IntAct http://www.ebi.ac.uk/intact/index.jsp|GNP_Y2H http://genomenetwork.nig.ac.jp/public/sys/gnppub/Top.do |
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| Data type | Protein-Proteome |
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| Biological species in the main concern | Homo sapiens [Taxonomy_id: 9606, human] |
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| Conditions of use | Freely available |
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| Frequency of updates (in last two years) | 1 |
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| Last date of updates (date of confirmation) | 2015/04/02 (2019/07/04) |
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| Main IDs used in the products | H-Inv cluster ID (HIX) | H-Inv transcript ID (HIT) | H-Inv protein ID (HIP) |
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| How to make a link to get access to each IDs. | None |
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| external databases to which this database/tool have links | None |
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| Published papers (PubMed IDs) | None |
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| Operational Status | available |
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