| Name | Integrated Cancer Genome Database |
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| Aliases | None |
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| Description | In order to identify genes responsible for drug sensitivities and side effects of anti-cancer drugs, the project genotyped about 3,000 SNPs in candidate genes for breast cancer patients by the Invader method. The database stores genotype frequencies of these SNPs and their relation with drug sensitivities and side effects. The candidate genes include 512 genes related to pharmacokinetics, DNA repair, apotosis, cell cycle control, angiogenesis, and inflammation. The database provides genotype frequencies of these SNPs and it is downloadable. |
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| Type | DB |
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| Main Institutes of management | Genome Center, Japanese Foundation for Cancer Research (JFCR) |
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| Country of the Institute | Japan |
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| URL of the site | http://genomecenter.jfcr.or.jp/genomedb/ |
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| Interface | Search site |
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| Input example | ABCA (gene name search) |
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| Keyword | Anticancer drug | Gene |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0.4|Select "CSV output" when all data of all genes are displayed. |
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| External resources (databases) in building the product. | Unable to set hyperlinks to individual data |
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| Data type | |
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| Biological species in the main concern | Homo sapiens [Taxonomy_id: 9606, human] |
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| Conditions of use | 2015 Copyright© AIST. |
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| Frequency of updates (in last two years) | 1 |
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| Last date of updates (date of confirmation) | 2013/03/01 (2019/07/04) |
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| Main IDs used in the products | HUGO gene symbol | dbSNP rs# (GemDBJ) |
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| How to make a link to get access to each IDs. | None |
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| external databases to which this database/tool have links | None |
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| Published papers (PubMed IDs) | None |
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| Operational Status | available |
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