Name | SAHG |
Aliases | Structural Atlas of Human Genome |
Description | SAHG is a comprehensive database, which exhibits protein structures encoded in the human genome. All of the Open Reading Frames encodeing proteins in the human genome are subjected to protein structure prediction. The development of this database is supported by JST(Japan Science and Technology Agency). (cited from original site) |
Type | DB |
Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
Country of the Institute | Japan |
URL of the site | https://dbarchive.biosciencedbc.jp/jp/sahg/desc.html |
Interface | GUI |
Input example | step1:Click an image of a chromosome on Top page.step2:Click a domain image. |
Keyword | structure|human|protein|prediction|blast|psi-blast|PPSW|P3A|FORTE|MODELLER |
Amount of the all data for download(Mbyte) | Method to obtain the all data. | 0|None |
External resources (databases) in building the product. | RefSeq|PDB|SCOP|HPRD|EzCatDB|KEGG |
Data type | Protein-structure |
Biological species in the main concern | human |
Conditions of use | http://dbarchive.biosciencedbc.jp/jp/sahg/lic.html |
Frequency of updates (in last two years) | 0 |
Last date of updates (date of confirmation) | 2010/06/25 (2019/07/02) |
Main IDs used in the products | RefSeq_ID |
How to make a link to get access to each IDs. | http://bird.cbrc.jp/sahg/cgi-bin/detail.cgi?rid=[RefSeq_ID]&domain=0 |
external databases to which this database/tool have links | RefSeq(http://www.ncbi.nlm.nih.gov/refseq/)|PDB(http://www.rcsb.org/pdb/home/home.do)|SCOP(http://scop.mrc-lmb.cam.ac.uk/scop/)|HPRD(http://www.hprd.org/index_html)|EzCatDB(http://mbs.cbrc.jp/EzCatDB/)|KEGG(http://www.genome.jp/kegg/kegg2.html)|Swiss-Prot(http://www.uniprot.org/)|InterPro(http://www.ebi.ac.uk/interpro/) |
Published papers (PubMed IDs) | pmid:21051360 |
Operational Status | available |