Database

SAHG

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NameSAHG
AliasesStructural Atlas of Human Genome
Description"SAHG is a comprehensive database, which exhibits protein structures encoded in the human genome. All of the Open Reading Frames encodeing proteins in the human genome are subjected to protein structure prediction. The development of this database is supported by JST(Japan Science and Technology Agency). (cited from original site)"
TypeDB
Main Institutes of management"Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the InstituteJapan
URL of the sitehttps://dbarchive.biosciencedbc.jp/jp/sahg/desc.html
InterfaceGUI
Input examplestep1:Click an image of a chromosome on Top page.step2:Click a domain image.
Keywordstructure|human|protein|prediction|blast|psi-blast|PPSW|P3A|FORTE|MODELLER
Amount of the all data for download(Mbyte) | Method to obtain the all data.0|None
External resources (databases) in building the product.RefSeq|PDB|SCOP|HPRD|EzCatDB|KEGG
Data typeProtein-structure
Biological species in the main concernhuman
Conditions of usehttp://dbarchive.biosciencedbc.jp/jp/sahg/lic.html
Frequency of updates (in last two years)0
Last date of updates (date of confirmation)2010/06/25 (2019/07/02)
Main IDs used in the productsRefSeq_ID
How to make a link to get access to each IDs.http://bird.cbrc.jp/sahg/cgi-bin/detail.cgi?rid=[RefSeq_ID]&domain=0
external databases to which this database/tool have linksRefSeq(http://www.ncbi.nlm.nih.gov/refseq/)|PDB(http://www.rcsb.org/pdb/home/home.do)|SCOP(http://scop.mrc-lmb.cam.ac.uk/scop/)|HPRD(http://www.hprd.org/index_html)|EzCatDB(http://mbs.cbrc.jp/EzCatDB/)|KEGG(http://www.genome.jp/kegg/kegg2.html)|Swiss-Prot(http://www.uniprot.org/)|InterPro(http://www.ebi.ac.uk/interpro/)
Published papers (PubMed IDs)pmid:21051360
Operational Statusavailable