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Tool

DAFS

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NameDAFS
AliasesNone
DescriptionSimultaneous aligning and folding of RNA sequences by dual decomposition. DAFS can take FASTA formatted RNA sequences as input, then producea structural alignment.
TypeTool
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the site-
InterfaceCUI
Input
Output
Input exampleex)This program producea structural alignment from FASTA formats: > dafs RF00005:0.fa
Keywordmaximizing expected accuracy|dual decomposition technique
Amount of the all data for download(Mbyte) | Method to obtain the all data.None
External resources (databases) in building the product.None
Data typeRNA
Biological species in the main concernAll species
Conditions of useGPLv.3
Frequency of updates (in last two years)0
Last date of updates (date of confirmation)2013/03/22 (2019/06/03)
Main IDs used in the productsN/A
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)pmid:23060618
Operational StatusClosed