AliasesRheumatoid Arthritis variome
DescriptionRAvariome is a human genetic variant database of autoimmune inflammatory disease Rheumatoid Arthritis (RA). RAvariome provides literature-curated data and "HOT variants", the significant and reproducible variants in different studies. Moreover, based on the confirmed associations, we developed genetic risk prediction tool that provides relative risk for RA to be usable for clinicians, researchers and the general public.
Main Institutes of managementMolecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the site
Input exampleIn the list of "HOT variants", Robustry confirmed RA susceptibility loci in different geographic populations are shown by default. To compare the results from different studies, just click a gene name, SNP id, or literature information.
Keywordrheumatoid arthritis | genetic variant|literature-curated data
Amount of the all data for download(Mbyte) | Method to obtain the all data.0|Coming soon
External resources (databases) in building the product.PubMed | dbSNP
Data typeGenetic/Genomic variants
Biological species in the main concernHomo sapiens [Taxonomy_id: 9606, human]
Conditions of useAttribution&Share Alike
Frequency of updates (in last two years)5
Last date of updates (date of confirmation)2013/09/26 (2019/07/03)
Main IDs used in the productsdbSNP rs# (GemDBJ) | PubMed ID
How to make a link to get access to each IDs.[dbSNP rs#]
external databases to which this database/tool have linksPubMed | dbSNP
Published papers (PubMed IDs)pmid:24158836
Operational Statusavailable