| Name | Rentropy |
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| Aliases | None |
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| Description | Rentropy computes entropy, mean energy, and variation of energy from the Boltzmann distribution of RNA secondary structures(cited from original site). |
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| Type | Tool |
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| Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
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| Country of the Institute | Japan |
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| URL of the site | - |
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| Interface | CUI |
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| Input | |
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| Output | |
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| Input example | run_rentropy.exe -outfile=rentropy_out.txt -command=compute_ent_subseq -seqfile=seqs.fa-max_span=200 -length_set=100,200: You can get I/O files in the downloaded file. |
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| Keyword | thermodynamic entropy|RNA secondary structures|Boltzmann distribution |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | None |
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| External resources (databases) in building the product. | None |
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| Data type | RNA |
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| Biological species in the main concern | All species |
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| Conditions of use | None |
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| Frequency of updates (in last two years) | 0time/year |
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| Last date of updates (date of confirmation) | 2011/00/00 (2019/07/08) |
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| Main IDs used in the products | N/A |
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| How to make a link to get access to each IDs. | None |
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| external databases to which this database/tool have links | N/A |
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| Published papers (PubMed IDs) | Hisanori Kiryu and Kiyoshi Asai.R-entropy: An algorithm for computing thermodynamic entropy of RNA secondary structures.(submitted) |
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| Operational Status | Closed |
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