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DescriptionRchange compute energy changes of RNA secondary structures in response to base mutations(cited from original site).
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the sitehttp://rtools.cbrc.jp/
InputNucleic acid sequence(FASTA format)
OutputEnergy change of secondary structure(Text、PDF,PNG,EPS)
Input examplerun_rchange -outfile=rchange_out.txt -command=compute_mut1 -seqfile=seqs.fa -max_span=200 -max_mut2_span=10 : You can get I/O files in the downloaded file.
KeywordAlgorithms|computing energy changes|RNA secondary structures|base mutations.
Amount of the all data for download(Mbyte) | Method to obtain the all data.None
External resources (databases) in building the product.None
Data typeRNA
Biological species in the main concernAll species
Conditions of useNone
Frequency of updates (in last two years)0time/year
Last date of updates (date of confirmation)2011/00/00 (2019/07/09)
Main IDs used in the productsN/A
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)pmid:22373787
Operational StatusAvailable