Name TMBETA-DISC
Aliases None
Description

"We have developed statistical and SVM based methods for discriminating beta barrel membrane proteins from amino acid sequence. The amino acid composition, residue pair preference and motifs are the major attributes for the program. 5 programs (TMBETADISC-COMP, TMBETADISC-DIPEPTIDE, TMBETADISC-MOTIF, TMBETADISC-SVM, TMBETADISC-RBF) was included in TMBETADISC (cited from the original site)."

Type DB
Main Institutes of management "Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the Institute Japan
URL of the site http://rbf.bioinfo.tw/~sachen/OMPpredict/TMBETADISC-RBF.php
Interface GUI
Input example

"Input example for TMBETADISC-RBF:Input amino acid sequences (FASTA-format) in the text box, push "submit" button. There is samples sequences on the down side of the top page. "

Keyword
SVM | amino acid composition | residue pair composition | motif composition | PSSM
Amount of the all data for download(Mbyte) | Method to obtain the all data. 0|None
External resources (databases) in building the product. None
Data type Protein-AminoAcid
Biological species in the main concern
All species
Conditions of use None
Frequency of updates (in last two years) 0
Last date of updates (date of confirmation) 2015/08/20 (2019/07/02)
Main IDs used in the products N/A
How to make a link to get access to each IDs. None
external databases to which this database/tool have links

N/A

Published papers (PubMed IDs)

pmid:18434251 | pmid:16204348 | pmid:15980447 | pmid:15833441 | pmid:15531602

Operational Status

Closed