1. Home
  2. Tool
  3. 10

Tool

TACT

noimage
NameTACT
AliasesTranscriptome Auto-annotation Conducting Tool
Description"Transcriptome Auto-annotation Conducting Tool (TACT) is a web-based automated prediction tool of functional annotation that was developed by integrating ORF prediction, similarity search (BLASTX and FASTY) and motif prediction (InterProScan). TACT was produced in collaboration with the H-Invitational project, and has contributed to the development of the H-Invitational Database (H-InvDB)."
TypeTool
Main Institutes of management"Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the InstituteJapan
URL of the site-
InterfaceGUI
Input
Output
Input example"At the top page, enter the query nucleotide sequences or DDBJ accession number and click on "Submit"."
KeywordGene
Amount of the all data for download(Mbyte) | Method to obtain the all data.0.0|None
External resources (databases) in building the product.DDBJ/EMBL/GenBank | Ensembl | Gene ontology (GO) | H-InvDB | InterPro | RefSeq | UCSC | UniProt
Data typeDNA-sequence
Biological species in the main concernHumannon-human 41 species (http://h-invitational.jp/tact/species.html)
Conditions of useAttribution&No Derivative WorksUser account is 1not required.
Frequency of updates (in last two years)9
Last date of updates (date of confirmation)2008/03/03 (2019/07/05)  
Main IDs used in the productsTranscript ID (DDBJ accession for H-InvDB transcripts)
How to make a link to get access to each IDs.http://h-invitational.jp/tact/cgi-bin/tact.cgi?acc=[DDBJ accession]
external databases to which this database/tool have linksH-InvDB(http://www.h-invitational.jp/)
Published papers (PubMed IDs)pmid:16845023
Operational StatusClosed