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HGPD
| Name | HGPD |
|---|---|
| Aliases | Human Gene and Protein Database |
| Description | HGPD is a unique database that stores the information of a set of human Gateway entry clones and protein expression data and helps the user to search the Gateway entry clones. In the full-length human cDNA sequencing project (FLJ project at NEDO), nucleotide sequences of approximately 30000 human cDNA clones have been analyzed.(cited from paper http://nar.oxfordjournals.org/cgi/content/abstract/gkn872?ijkey=zKpNqhZH6jrUuzi&keytype=ref) |
| Type | DB |
| Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | https://hgpd.lifesciencedb.jp/cgi/ |
| Interface | GUI |
| Input example | Input the Accession No. "AK092682" in the text box on the upper side of the top page, the push "submit" button. |
| Keyword | FLJ cDNAs | Gateway Entry Clones | Protein Analysis Data | Subcellular Localizaiton |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 48|Download from the page http://hgpd.lifesciencedb.jp/sys_info/download.html |
| External resources (databases) in building the product. | None |
| Data type | DNA-sequence |
| Biological species in the main concern | Homo sapiens [Taxonomy_id: 9606, human] |
| Conditions of use | https://hupex.hgpd.jp/hgpd/mta/License%20No19.pdf |
| Frequency of updates (in last two years) | 7 |
| Last date of updates (date of confirmation) | 2016/10/26 (2019/07/02) |
| Main IDs used in the products | Accession Number | Sequence ID |
| How to make a link to get access to each IDs. | http://hgpd.lifesciencedb.jp/SVDB_v05/cgi/sv_cdna_info.cgi?cdna=C-SKMUS2000679 |
| external databases to which this database/tool have links | NCBI | DDBJ | FLJ Human cDNA Database | FLJ-DB | H-Inv DB | NEDO | HUGE | MGC | The German Human cDNA Project | UniGene | CGAP | SAGE | TIGR Gene Indices | STACK | BODYMAP | NITE | AIST | Japan Biological Informatics Consortium | Research Association for Biotechnology | Reverse Proteomics Research Institute |
| Published papers (PubMed IDs) | pmid:19054851 | pmid:19073703 | pmid:22140100 |
| Operational Status | available |
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