Database

HGPD

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NameHGPD
AliasesHuman Gene and Protein Database
Description"HGPD is a unique database that stores the information of a set of human Gateway entry clones and protein expression data and helps the user to search the Gateway entry clones. In the full-length human cDNA sequencing project (FLJ project at NEDO), nucleotide sequences of approximately 30000 human cDNA clones have been analyzed.(cited from paper http://nar.oxfordjournals.org/cgi/content/abstract/gkn872?ijkey=zKpNqhZH6jrUuzi&keytype=ref)"
TypeDB
Main Institutes of management"Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the InstituteJapan
URL of the sitehttps://hupex.hgpd.jp/hgpd/cgi/index.cgi
InterfaceGUI
Input example"Input the Accession No. "AK092682" in the text box on the upper side of the top page, the push "submit" button. "
KeywordFLJ cDNAs | Gateway Entry Clones | Protein Analysis Data | Subcellular Localizaiton
Amount of the all data for download(Mbyte) | Method to obtain the all data.48|Download from the page http://hgpd.lifesciencedb.jp/sys_info/download.html
External resources (databases) in building the product.None
Data typeDNA-sequence
Biological species in the main concern"Homo sapiens [Taxonomy_id: 9606, human]"
Conditions of usehttps://hupex.hgpd.jp/hgpd/mta/License%20No19.pdf
Frequency of updates (in last two years)7
Last date of updates (date of confirmation)2016/10/26 (2019/07/02)
Main IDs used in the productsAccession Number | Sequence ID
How to make a link to get access to each IDs.http://hgpd.lifesciencedb.jp/SVDB_v05/cgi/sv_cdna_info.cgi?cdna=C-SKMUS2000679
external databases to which this database/tool have linksNCBI | DDBJ | FLJ Human cDNA Database | FLJ-DB | H-Inv DB | NEDO | HUGE | MGC | The German Human cDNA Project | UniGene | CGAP | SAGE | TIGR Gene Indices | STACK | BODYMAP | NITE | AIST | Japan Biological Informatics Consortium | Research Association for Biotechnology | Reverse Proteomics Research Institute
Published papers (PubMed IDs)pmid:19054851 | pmid:19073703 | pmid:22140100
Operational Statusavailable