Name | MXSCARNA |
Aliases | MXSCARNA |
Description | MXSCARNA (Multiplex Stem Candidate Aligner for RNAs) is a multiple alignment tool for RNA sequences using progressive alignment based on pairwise structural alignment algorithm of SCARNA. |
Type | Tool |
Main Institutes of management | Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST) |
Country of the Institute | Japan |
URL of the site | - |
Interface | GUI |
Input | |
Output | |
Input example | Input RNA sequences, so MXSCARNA shows the multiple alignment and secondary structure. |
Keyword | RNA | common secondary structure | multiple alignment |
Amount of the all data for download(Mbyte) | Method to obtain the all data. | 2.5|From top page. |
External resources (databases) in building the product. | None |
Data type | RNA (RNA sequence) |
Biological species in the main concern | All species |
Conditions of use | None |
Frequency of updates (in last two years) | 3 |
Last date of updates (date of confirmation) | 2007/11/24 (2019/07/08) |
Main IDs used in the products | - |
How to make a link to get access to each IDs. | - |
external databases to which this database/tool have links | - |
Published papers (PubMed IDs) | pmid:18215258 |
Operational Status | Closed |