Name MXSCARNA
Aliases MXSCARNA
Description

MXSCARNA (Multiplex Stem Candidate Aligner for RNAs) is a multiple alignment tool for RNA sequences using progressive alignment based on pairwise structural alignment algorithm of SCARNA.

Type Tool
Main Institutes of management "Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the Institute Japan
URL of the site -
Interface GUI
Input

Output

Input example

"Input RNA sequences, so MXSCARNA shows the multiple alignment and secondary structure."

Keyword
RNA | common secondary structure | multiple alignment
Amount of the all data for download(Mbyte) | Method to obtain the all data. 2.5|From top page.
External resources (databases) in building the product. None
Data type RNA (RNA sequence)
Biological species in the main concern
All species
Conditions of use None
Frequency of updates (in last two years) 3
Last date of updates (date of confirmation) 2007/11/24 (2019/07/08)
Main IDs used in the products -
How to make a link to get access to each IDs. -
external databases to which this database/tool have links

-

Published papers (PubMed IDs)

pmid:18215258

Operational Status

Closed