Database

MiFuP Safety

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NameMiFuP Safety
Aliasesnone
DescriptionIt is a database that searches for genes related to harmfulness from the genome information of microorganisms and estimates harmfulness of microorganisms. When a nucleotide sequence of a microbial genome or amino acid sequence is inputted, You can estimate that the target microorganism has a harmful function, detecting a gene region concerning toxicity (toxin production, drug resistance etc.) in the sequence.
TypeDB
Main Institutes of managementBiological Resource Center, National Institute of Technology and Evaluation (NITE)
Country of the InstituteJapan
URL of the sitehttps://www.nite.go.jp/nbrc/mrinda/mifup_safety/
InterfaceGUI
Input exampleYou can search by either Genome, CDS nucleotide or CDS protein sequences.
KeywordBacteria
Amount of the all data for download(Mbyte) | Method to obtain the all data.0.0|none
External resources (databases) in building the product.PubMed | UniProt | BioCyc | BRENDA | CAZy | HAMAP | HOGENOM | InterPro | KEGG | MEROPS | Pfam | PIRSF | PRINTS | ProDom | PROSITE | SMART | TCDB | TIGRFAMs | UniPathway
Data typeDNA-sequence| Amino acid sequence| Annotation
Biological species in the main concernBacteria
Conditions of usenone
Frequency of updates (in last two years)any time
Last date of updates (date of confirmation)2021/10/26 (2021/11/10)
Main IDs used in the productsNFUNC_ID | NRULE_ID
How to make a link to get access to each IDs.https://www.nite.go.jp/nbrc/mrinda/mifup_safety/functions/view/id/[NFUNC_ID] | https://www.nite.go.jp/nbrc/mrinda/mifup_safety/rules/view/id/[NRULE_ID]
external databases to which this database/tool have linksnone
Published papers (PubMed IDs)none
Operational Statusavailable