Database

MiFuP

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NameMiFuP
AliasesMicrobial Functional Potential
Description"MiFuP is a database of functional potentials deduced from microbial genomes. You can easily search for microbes with potential functions of your interest.In the function search, you can search for functional potentials from your microbial genome sequences or cds sequences. Associated MiFuP wiki is an information web site about microbial functions (e.g., detailed description of each function, underlying mechanisms, representative microbes, industrial use). MiFuP wiki is in Japanese only."
TypeDB
Main Institutes of managementNational Institute of Technology and Evaluation (NITE)
Country of the InstituteJapan
URL of the sitehttps://www.nite.go.jp/nbrc/mifup/
InterfaceGUI
Input exampleEnter search words. (e.g. biosynthesis)
Keyword"Microbiological function, Microbiota, Genome sequence"
Amount of the all data for download(Mbyte) | Method to obtain the all data.0.0|None
External resources (databases) in building the product. PubMed | UniProt | BioCyc | BRENDA | CAZy | eggNOG | GO | HAMAP | HOGENOM | InterPro | KEGG | MAIZEGDB | MEROPS | Pfam | PIRSF | PRINTS | ProDom | PROSITE | ProtClustDB | SMART | TCDB | TIGRFAMs | UniPathway
Data typeAnnotation
Biological species in the main concernBacterium
Conditions of useAttribution&Share Alike
Frequency of updates (in last two years)2 times/year (planned)
Last date of updates (date of confirmation)2019/03/26 (2019/07/02)
Main IDs used in the productsNRULE_ID | NFUNC_ID
How to make a link to get access to each IDs.http://www.bio.nite.go.jp/mifup/functions/view/id/[NFUNCID] | http://www.bio.nite.go.jp/mifup/ rules/view/id/[NRULEID]
external databases to which this database/tool have linksnone
Published papers (PubMed IDs)none
Operational Statusavailable