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Tool

seg-suite

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Nameseg-suite
AliasesNone
DescriptionThe seg suite provides tools for manipulating segments and alignments. It uses a format called "seg". This program converts segments or alignments from various formats to seg.
TypeTool
Main Institutes of managementComputational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST)
Country of the InstituteJapan
URL of the sitehttp://cbrc3.cbrc.jp/~martin/seg-suite/
InterfaceCUI
Input
Output
Input exampleex)This program converts segments or alignments from various formats to seg:seg-import maf myAlignments.maf > myAlignments.seg
Keywordalignmenet|segment
Amount of the all data for download(Mbyte) | Method to obtain the all data.0.1|Download the software from the page http://cbrc3.cbrc.jp/~martin/seg-suite/seg-suite-11.zip
External resources (databases) in building the product.None
Data typeDNA-sequence , RNA-sequence
Biological species in the main concernAll species
Conditions of useGPLv3
Frequency of updates (in last two years)1
Last date of updates (date of confirmation)2014/01/14 (2019/06/03)
Main IDs used in the productsN/A
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)None
Operational StatusAvailable