Database

Reference database for gene Expression Analysis

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NameReference database for gene Expression Analysis
AliasesRefExA
DescriptionRefExA is a exhaustive gene expression database for human normal tissue, normal cell and cancer cell.
TypeDB
Main Institutes of managementEpigenome and Signaling Cluster, The University of Tokyo (ESCUT)
Country of the InstituteJapan
URL of the sitehttp://sbmdb.genome.rcast.u-tokyo.ac.jp/refexa/main_search.jsp
InterfaceGUI
Input exampleYou can choose 2 search types (Quick, Advanced).Search term is Genbank accession, UniGene cluster ID, Gene symbol, Gene name etc.Input term and click "Search" button.
KeywordHuman normal tissue | normal cell | cancer cell | gene expression
Amount of the all data for download(Mbyte) | Method to obtain the all data.0|If you are interested in entire dataset, please contact us via dbadmin@genome.rcast.u-tokyo.ac.jp.
External resources (databases) in building the product.UniGene | NetAffx
Data typeDisease-cancer gene expression
Biological species in the main concernHomo sapiens [Taxonomy_id: 9606, human]
Conditions of useNone
Frequency of updates (in last two years)No update for more than 2 years
Last date of updates (date of confirmation)2006/00/00 (2019/07/02)
Main IDs used in the productsAccession Number | Probe Set ID
How to make a link to get access to each IDs.None
external databases to which this database/tool have linksNone
Published papers (PubMed IDs)None
Operational Statusavailable