Name JSNP DATABASE
Aliases JSNP
Description

The standard allele frequency of 786 Japanese SNPs has been registered since Release 9. NEDO project detaset is includes in JSNP.

Type DB
Main Institutes of management The University of Tokyo and Japan Science and Technology Agency(JST)
Country of the Institute Japan
URL of the site http://snp.ims.u-tokyo.ac.jp/index.html
Interface GUI
Input example

"Input the keyword "BRCA1" in the text box on the upper side of the top page, the push "Search" button. "

Keyword
SNPs
Amount of the all data for download(Mbyte) | Method to obtain the all data. 14.1|Download from the page http://snp.ims.u-tokyo.ac.jp/data_download.html
External resources (databases) in building the product. Under investigation
Data type single nucleotide polymorphism (SNP) allele frequency
Biological species in the main concern
"Homo sapiens [Taxonomy_id: 9606, human]"
Conditions of use User account is required for Genetype frequency data download.
Frequency of updates (in last two years) 2
Last date of updates (date of confirmation) 2013/03/27 (2013/03/28)
Main IDs used in the products JSNP ID
How to make a link to get access to each IDs. http://snp.ims.u-tokyo.ac.jp/cgi-bin/SnpInfo.cgi?SNP_ID=[JSNP ID]
external databases to which this database/tool have links

N/A

Published papers (PubMed IDs)

pmid:12436197 | pmid:11752280 | pmid:12426569