Database

JSNP DATABASE

noimage
NameJSNP DATABASE
AliasesJSNP
DescriptionThe standard allele frequency of 786 Japanese SNPs has been registered since Release 9. NEDO project detaset is includes in JSNP.
TypeDB
Main Institutes of managementThe University of Tokyo | Japan Science and Technology Agency (JST)
Country of the InstituteJapan
URL of the sitehttps://dbarchive.biosciencedbc.jp/jp/jsnp/desc.html
InterfaceGUI
Input example"Input the keyword "BRCA1" in the text box on the upper side of the top page, the push "Search" button. "
KeywordSNPs
Amount of the all data for download(Mbyte) | Method to obtain the all data.14.1|Download from the page http://snp.ims.u-tokyo.ac.jp/data_download.html
External resources (databases) in building the product.None
Data typesingle nucleotide polymorphism (SNP) allele frequency
Biological species in the main concern"Homo sapiens [Taxonomy_id: 9606, human]"
Conditions of useCC BY-SA 2.1 JP
Frequency of updates (in last two years)2
Last date of updates (date of confirmation)2014/05/08 (2019/07/02)
Main IDs used in the productsJSNP ID
How to make a link to get access to each IDs.http://snp.ims.u-tokyo.ac.jp/cgi-bin/SnpInfo.cgi?SNP_ID=[JSNP ID]
external databases to which this database/tool have linksN/A
Published papers (PubMed IDs)pmid:12436197 | pmid:11752280 | pmid:12426569
Operational StatusArchived