Name | MDV |
Aliases | Motif Distribution Viewer |
Description | Motif Distribution Viewer (MDV) is a web tool for visualizing the distribution of various motifs around transcription start sites (TSS) on a user-defined set of promoter sequences. The tool can be used on the original site, as well as downloaded to used locally. (cited from original site). |
Type | Tool |
Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
Country of the Institute | Japan |
URL of the site | - |
Interface | GUI |
Input | |
Output | |
Input example | Step1: Select a gene set and, if needed, input IDs to examine (HIX or RefSeq ID).Step 2: Set parameters.Step 3: Select a motif-view from the four and click "Submit" button of your choice. |
Keyword | cis-element|promoter|transcription start site (TSS)|two-dimensional display|multiple motifs|microarray |
Amount of the all data for download(Mbyte) | Method to obtain the all data. | 207|http://h-invitational.jp/mdv/doc/download.html |
External resources (databases) in building the product. | H-InvDB | RefSeq | DBTSS | JASPAR |
Data type | DNA-motif |
Biological species in the main concern | Human, mouse promoters are available on the site. |
Conditions of use | Attribution&Share Alike |
Frequency of updates (in last two years) | 0 |
Last date of updates (date of confirmation) | 2009/09/20 (2019/06/03) |
Main IDs used in the products | H-Inv cluster ID (HIX) | RefSeq ID |
How to make a link to get access to each IDs. | None |
external databases to which this database/tool have links | - |
Published papers (PubMed IDs) | None |
Operational Status | Closed |