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MCG CNV Database
| Name | MCG CNV Database |
|---|---|
| Aliases | None |
| Description | The MCG CNV Database provides copy number variant ( CNV ) and loss of heterozygosity ( LOH ) detected through microarray analyses in healthy Japanese by our in-house BAC-based arrays, so-called MCG arrays1), and SNP array ( illumina, HumanOmniExpress Beadchip ). The MCG CNV Database shows an incidence of CNV and LOH in the Japanese healthy population and can be of assistance to estimate a pathogenicity of CNV or LOH detected in subjects having possible involvement of cryptic genomic aberrations behind their pathogenesis.(cited from original site) |
| Type | DB |
| Main Institutes of management | Tokyo Medical and Dental University |
| Country of the Institute | Japan |
| URL of the site | http://www.cghtmd.jp/CNVDatabase/top!changeEngLocale |
| Interface | GUI |
| Input example | Step1.Push the "Data View" menu on the upper side of the top page.Step2.Click one point on clomosome map figures. |
| Keyword | CNV|BAC|MCG|SNP|de novo|family|illumina |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0|None |
| External resources (databases) in building the product. | Genesymbol|Refseq|Database of Genomic Variants |
| Data type | DNA-polymol array |
| Biological species in the main concern | Homo sapiens [Taxonomy_id: 9606, human] |
| Conditions of use | None |
| Frequency of updates (in last two years) | 1time/year |
| Last date of updates (date of confirmation) | 2013/03/00 (2019/07/03) |
| Main IDs used in the products | Clone ID (original) |
| How to make a link to get access to each IDs. | http://www.cghtmd.jp/CNVDatabase/cnv-chrom-map.action#[Clone ID] |
| external databases to which this database/tool have links | UCSC(http://genome.ucsc.edu/)|NCBI(http://www.ncbi.nlm.nih.gov/)|Database of Genomic Variants(http://projects.tcag.ca) |
| Published papers (PubMed IDs) | pmid:15245590 |
| Operational Status | available |
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