| Name | BioDBScan |
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| Aliases | None |
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| Description | BioDBScan is a free web-based application that alerts you when any data about genes, proteins, chemicals or drugs of your interest is newly released in world-renowned databases such as NCBI, Ensembl, DrugBank and others. It delivers an E-mail message every Monday if any data is detected by the Hyperlink Management System.BioDBScan was developed as a new function of PubMedScan by 2011-2012 METI Life-science Database Project. It is operated by Biomedicinal Information Research Center, National Institute of Advanced Industrial Science and Technology. |
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| Type | Tool |
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| Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
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| Country of the Institute | Japan |
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| URL of the site | - |
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| Interface | GUI |
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| Input | |
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| Output | |
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| Input example | Register user name and e-mail address to PubMedScan. Move to BioDBScan, register IDs of your interest.E-mail reports about newly-released data will be delivered every Monday. |
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| Keyword | content filtering recommendation | content-based recommendation |
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| Amount of the all data for download（Mbyte） | Method to obtain the all data. | 0|None |
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| External resources (databases) in building the product. | Hyperlink Management System |
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| Data type | genes, pathways, diseases, etc. |
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| Biological species in the main concern | Homo sapiens, Mus musculus, Rattus norvegicus, Ciona intestinalis |
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| Conditions of use | GPL |
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| Frequency of updates (in last two years) | 52 times/year |
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| Last date of updates (date of confirmation) | 2013/01/29 (2019/07/08) |
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| Main IDs used in the products | Accession Number | CIPRO ID | Clone ID (NBRC) | DGV ID | DrugBank ID | Ensembl Gene ID | Ensembl Protein ID | Ensembl Transcript ID | FLJ ID (NBRC) | GeneID | H-GOLD Marker ID | H-Inv cluster ID (HIX) | H-Inv protein ID (HIP) | H-Inv transcript ID (HIT) | HPRD ID | HUGO gene symbol | KEGG Gene ID | KEGG Pathway ID | OMIM ID | PDB ID | PdbeChem ID | Peptide Accession | PubMed ID | RefSeq ID | RefSeq Protein ID | UniProt Accession Number | dbSNP rs# (GemDBJ) | fRNAdb ID | ALLELE ID | BRC ID | Clone ID(FANTOM) | MGI Marker Accession ID | Mouse Gene Symbol RGD ID | CAS ID | ChEBI ID | DrugBank ID | HMDB Accession Number | KEGG Compound ID | KEGG Drug ID | KNApSAcK ID | NIKKAJI ID | PDBeChem ID | PharmGKB ID | PubChem Compound ID | PubChem Substance ID |
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| How to make a link to get access to each IDs. | Noe |
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| external databases to which this database/tool have links | Hyperlink Management System (http://biodb.jp/) |
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| Published papers (PubMed IDs) | None |
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| Operational Status | Closed |
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