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VarySysDB
| Name | VarySysDB |
|---|---|
| Aliases | None |
| Description | This is a system to search, display, and download our research results on human polymorphism based on publicly available data and annotations of transcripts presented by H-InvDB. It provides information about single nucleotide polymorphisms (SNPs), deletion-insertion polymorphisms (DIPs), short tandem repeats (STRs), single amino acid repeats (SARs), structural variation (or copy number variations: CNVs), and their relations to the genome, transcripts, and functional domains. |
| Type | DB |
| Main Institutes of management | Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST) |
| Country of the Institute | Japan |
| URL of the site | http://h-invitational.jp/varygene/home.htm |
| Interface | Search site |
| Input example | Put down "HIX" etc. in the input form on upper right of top page and click "GO" button. |
| Keyword | Transcriptional product |
| Amount of the all data for download（Mbyte） | Method to obtain the all data. | -|None |
| External resources (databases) in building the product. | H-InvDB | dbSNP |
| Data type | |
| Biological species in the main concern | Homo sapiens [Taxonomy_id: 9606, human] |
| Conditions of use | CC BY-SA 2.1 JP |
| Frequency of updates (in last two years) | 1 |
| Last date of updates (date of confirmation) | 2015/04/02 (2019/07/04) |
| Main IDs used in the products | H-Inv cluster ID (HIX) | HUGO gene symbol |
| How to make a link to get access to each IDs. | None |
| external databases to which this database/tool have links | None |
| Published papers (PubMed IDs) | None |
| Operational Status | available |
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