Name TACT
Aliases Transcriptome Auto-annotation Conducting Tool
Description

"Transcriptome Auto-annotation Conducting Tool (TACT) is a web-based automated prediction tool of functional annotation that was developed by integrating ORF prediction, similarity search (BLASTX and FASTY) and motif prediction (InterProScan). TACT was produced in collaboration with the H-Invitational project, and has contributed to the development of the H-Invitational Database (H-InvDB)."

Type Tool
Main Institutes of management "Molecular Profiling Research Center for Drug Discovery (molprof), National Institute of Advanced Industrial Science and Technology (AIST)"
Country of the Institute Japan
URL of the site Closed
Interface GUI
Input example

Keyword
Under investigation
Amount of the all data for download(Mbyte) | Method to obtain the all data. 0.0|None
External resources (databases) in building the product. DDBJ/EMBL/GenBank | Ensembl | Gene ontology (GO) | H-InvDB | InterPro | RefSeq | UCSC | UniProt
Data type DNA-sequence
Biological species in the main concern
Humannon-human 41 species (http://h-invitational.jp/tact/species.html)
Conditions of use Attribution&No Derivative WorksUser account is 1not required.
Frequency of updates (in last two years) 9
Last date of updates (date of confirmation) 2008/03/03 (2008/10/06)
Main IDs used in the products Transcript ID (DDBJ accession for H-InvDB transcripts)
How to make a link to get access to each IDs. http://h-invitational.jp/tact/cgi-bin/tact.cgi?acc=[DDBJ accession]
external databases to which this database/tool have links

H-InvDB(http://www.h-invitational.jp/)

Published papers (PubMed IDs)

pmid:16845023